PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023524575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 165aa MW: 18452.3 Da PI: 8.9439 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.0011 | 62 | 84 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_023524575.1 62 FVCKTCNREFSSFQALGGHRTSH 84 89**********99998888777 PP | |||||||
2 | zf-C2H2 | 11.4 | 0.001 | 101 | 123 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg F+ L H+r+H XP_023524575.1 101 HECPICGLDFPIGQALGGHMRRH 123 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MKREREGGEF EVLDMVDCLM LLSRMEEPRR KNDCLMLLSK MEEPRRKNGF SPTPAADSDK 60 IFVCKTCNRE FSSFQALGGH RTSHTKPNFN ANGPPTKSKA HECPICGLDF PIGQALGGHM 120 RRHRNTAAAA AVLKKSDGCG KRIFELDLNL PPLENNLNLK LQLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 3e-32 | C2H2 family protein |