PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023524388.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GATA | ||||||||
Protein Properties | Length: 195aa MW: 21723.2 Da PI: 7.6443 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 31.9 | 1.9e-10 | 155 | 174 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 Cs C+tt+TplWR+gp+g+k XP_023524388.1 155 CSDCNTTTTPLWRSGPQGPK 174 ******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MNSLYPLMAK HEEHEEHEEQ HPDLKLYIFP STSQVAAASS HLAFATCFTS SATQHDHQRM 60 DLHHHQNQGE KSIDGSRTDI DHQEQQLDEY QIKKGDNGSA AKYWMSSKMR LMQKMMKVGG 120 GNSDQAAAAA VAAAGRRSNN NEGRSCCSSN GVRVCSDCNT TTTPLWRSGP QGPKVIPLLY 180 LTNYFNFTVP KPQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 3e-13 | GATA family protein |