PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524318.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 294aa    MW: 32128.7 Da    PI: 7.5591
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA603.1e-19155188134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  XP_023524318.1 155 CSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKAR 188
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MNSLYPLMAK HEEHEEHEEQ HPDLKLYIFP STSQVAAASS HLAFATCFTS SATQHDHQRM  60
DLHHHQNQGE KSIDGSRTDI DHQEQQLDEY QIKKGDNGSA AKYWMSSKMR LMQKMMKVGG  120
GNSDQAAAAA VAAAGRRSNN NEGRSCCSSN GVRVCSDCNT TTTPLWRSGP QGPKSLCNAC  180
GIRQRKARRA MAEAANGGGG GAVVAAASGK ELHKEKKSRL SWHGDDDDDE EVKKKKGNNR  240
NMGEKCLESQ SEGRNDGVLR LSKNGSAFGR VFPRDEEEAA ILLMELSCGL VHTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-20GATA family protein