PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524287.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 325aa    MW: 36378 Da    PI: 7.9516
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.41.6e-29164223159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C+sa +Cpvkkkv+rs edp++++ tYegeH h 
  XP_023524287.1 164 VKDGYQWRKYGQKVTRDNPSPRAYFKCSSApNCPVKKKVQRSLEDPTILVATYEGEHSHA 223
                     58**************************999****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MDIFLDLNLN PSSSYPNSAM DEALHSSKRE VEAAEMNLDQ EKLTLSLANK GSDFRATLEE  60
KLDRKIKENG RLSQMLRAMY EKYMNLQKQV MYLVNQQKVQ SSEIEGVSRK RRAEGEEEYE  120
NLEGICSSRD EDFNRWLKRP RLNGNSKVSK VFVQKDASDP SLVVKDGYQW RKYGQKVTRD  180
NPSPRAYFKC SSAPNCPVKK KVQRSLEDPT ILVATYEGEH SHASHFQTEL SLRSINGGKA  240
SAVPVLATIK PSCASVTLDL IHEDGLFKSP KDYAASESAA STEAAVWQEF LVQQMASSLK  300
KDPEFAGIVA GAISGKVLGN QTNRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.18e-60WRKY family protein