PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524286.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 326aa    MW: 36506.1 Da    PI: 7.9516
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.41.7e-29165224159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C+sa +Cpvkkkv+rs edp++++ tYegeH h 
  XP_023524286.1 165 VKDGYQWRKYGQKVTRDNPSPRAYFKCSSApNCPVKKKVQRSLEDPTILVATYEGEHSHA 224
                     58**************************999****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDIFLDLNLN PSSSYPNSAM DEALHSSQKR EVEAAEMNLD QEKLTLSLAN KGSDFRATLE  60
EKLDRKIKEN GRLSQMLRAM YEKYMNLQKQ VMYLVNQQKV QSSEIEGVSR KRRAEGEEEY  120
ENLEGICSSR DEDFNRWLKR PRLNGNSKVS KVFVQKDASD PSLVVKDGYQ WRKYGQKVTR  180
DNPSPRAYFK CSSAPNCPVK KKVQRSLEDP TILVATYEGE HSHASHFQTE LSLRSINGGK  240
ASAVPVLATI KPSCASVTLD LIHEDGLFKS PKDYAASESA ASTEAAVWQE FLVQQMASSL  300
KKDPEFAGIV AGAISGKVLG NQTNRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.19e-60WRKY family protein