PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023524228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 404aa MW: 43608.6 Da PI: 5.8953 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.2 | 3.9e-10 | 239 | 287 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_023524228.1 239 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 287 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS 60 SHRDFSNSFP IVLENHHHGG GSGTSQTVQY PTDLEMGTKL PCFGSGNYSD MFGSFGLADQ 120 ILGGCSSSYR NGGTANTAQT SQETLPPPSG EEAALGSPNG KIRKRALDSA FPFSSNTKSE 180 GKVKKDVSGE SSSTQEEKNP EMEQNLRSGK QAKEKSSNSG EAPKENYIHV RARRGQATNS 240 HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV 300 NPDMNIDLER ILSKDIFQVR GSNGSVLGFD HPGMSAAPPV VPAHRMFQFQ GMMSNMASTS 360 TSTQFPSLPQ TMLESDIQTL LQMGFDSGSA IDNLGPNGRL KAER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-77 | bHLH family protein |