PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523438.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 270aa MW: 30847.1 Da PI: 8.4198

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.5	9e-52	17	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeel+ +yL++kve+k++ + e+ik++diyk++PwdLpk + +ekewyfF++r +ky+++ r+nr+t+sg+Wkatg dk+++s+ XP_023523438.1 17 MLPGFRFHPTDEELIGFYLRRKVEKKPIAI-EIIKQIDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTESGFWKATGIDKPIFST 110 579*************************.89***********8888899***********************************9 PP NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_023523438.1 111 lkpNQECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 146 9888999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MEVPSKLVDV EEEDEVMLPG FRFHPTDEEL IGFYLRRKVE KKPIAIEIIK QIDIYKYDPW 60 DLPKVSNVGE KEWYFFCTRG RKYRNSIRPN RVTESGFWKA TGIDKPIFST LKPNQECIGL 120 KKSLVYYRGS AGKGTKTDWM MHEFRLPFNT NSPQHYHAEV WTLCRIFRRI PSIRKYSPIM 180 SPIPQNPNNN SFNSHPFPTL IDLETKPNPS LTLPYASFEP SSLYPSSFWN GVDGGGRDGG 240 GGGGGDVLTS GGWDELQLVV QMSPSTIFNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	243	GGGRDGGGGG
2	235	244	GGGRDGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-88	NAC family protein