PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523319.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 365aa MW: 40366.8 Da PI: 9.6146

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.5	1.3e-32	211	264	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023523319.1 211 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 264 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	212	263	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023523319.1 212 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 263 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNASSS SSSSSSNSSS IKTLTHGFPQ TNFDLLSNSD 60 NPRAHTDLSL GTNNDLPGRA LLPPPLHHLR GVSGFDVSDR LRPIKGIPVY HNRPFPFLAV 120 DQKDHRYHHH QNHHQFSSFY PNYSNPNGVL QTGYRNSAAR FNNGTVSVEG IKSLHSNSNA 180 ASSSSDVCSH GMMMRSRFLQ KLPPKRSMRA PRMRWTTSLH ARFVHAVEHL GGHERATPKS 240 VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGDDDVSPTI CTGRGDNAPR 300 QFSDQRAPLE RSGQPPPDWE FGSSTLWSNS SRDVWPQTNS NETDIIRPNS STRMQQKSMH 360 QIEVP

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNASSS SSSSSSNSSS IKTLTHGFPQ TNFDLLSNSD  60
NPRAHTDLSL GTNNDLPGRA LLPPPLHHLR GVSGFDVSDR LRPIKGIPVY HNRPFPFLAV  120
DQKDHRYHHH QNHHQFSSFY PNYSNPNGVL QTGYRNSAAR FNNGTVSVEG IKSLHSNSNA  180
ASSSSDVCSH GMMMRSRFLQ KLPPKRSMRA PRMRWTTSLH ARFVHAVEHL GGHERATPKS  240
VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGDDDVSPTI CTGRGDNAPR  300
QFSDQRAPLE RSGQPPPDWE FGSSTLWSNS SRDVWPQTNS NETDIIRPNS STRMQQKSMH  360
QIEVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	8e-54	G2-like family protein