PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522953.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WOX
Protein Properties Length: 198aa    MW: 22440.7 Da    PI: 9.9096
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox696.1e-2272131357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eq+ +Le l+++  r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  XP_023522953.1  72 TRWNPTQEQIAILEMLYRRgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 131
                     7*****************99**************************************97 PP
2Wus_type_Homeobox119.31.7e-3872133465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq
     XP_023522953.1  72 TRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 133
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGLTMKLHHF SPCSWDEPSL SLACTKRLRP PPPTSATSTL TAFDLKTFIK PDTKKDPSSP  60
RTGVVEMQPG GTRWNPTQEQ IAILEMLYRR GMRTPNAQQI EQITAQLGKY GKIEGKNVFY  120
WFQNHKARER QKQKRNTLGL AHSSPITPPT TTTIVTAIPF DPSGGEDSPY KRKCMNWGFE  180
CLVEDRTLEL FPLHPEGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.13e-56WOX family protein