PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522689.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 95aa    MW: 11067.6 Da    PI: 4.2959
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-075578730
                    HHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH  7 erErrRRdriNsafeeLrellPka 30
                      Er+RR+++N+++  Lr ++P+ 
  XP_023522689.1 55 LSERNRRKKLNDRLLALRAVVPNI 78
                    57********************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MENILDEYQY YWETNMFLQT EEFDSWGVDE AFYGSYDSSS PDGTPSSLEA SKNILSERNR  60
RKKLNDRLLA LRAVVPNITK VSQIIIIIII IIIIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.41e-19bHLH family protein