PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522473.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GATA | ||||||||
Protein Properties | Length: 172aa MW: 19217.5 Da PI: 9.4455 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57 | 2.6e-18 | 124 | 158 | 1 | 33 |
GATA 1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C+ nC+t Tp+WR+gp g+k+LCnaCG++yrk+ XP_023522473.1 124 CTnyNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 158 55559****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MVNNNHGLAS SGGRSGEMMS EANYNPHQIV WSKELKTYVL KSNNFGQLHP SLYCNTYPAK 60 TIGSTANSMA NLPLQNYNND QYTLLNPACR KTDDHEAEAS SGGGRRRGLQ RRRVSACNEV 120 ERRCTNYNCN TNFTPMWRKG PLGPKSLCNA CGIRYRKEIM NKEAVAAENN HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 2e-16 | GATA family protein |