PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522395.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 263aa MW: 29007.8 Da PI: 9.4529

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.8	2.4e-33	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_023522395.1 45 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	59.1	9.7e-19	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g+t +++ks++qky+ XP_023522395.1 47 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQKYR 98 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MYHAKKFSTA SLVPHKSQGA EQGASVAVLG GSSAKSSMPP GGGGKQRLRW TSDLHDRFVD 60 AITQLGGPDR ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYLPESPADG KAIFYPATTT 120 CLSIKCIDFT WIIPYWRVGS KDEKRSSESL SGTDSSSGLQ INEALRMQME VQKRLQEQLE 180 VQRQLQMRIE AQAKYLQKII EEQQKLGGES KDTEALPSTE DNKQKTCQSE SYSDVSAEPS 240 SPRKKQRVDH GTTDDSAPSI NLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-48	G2-like family protein