PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522211.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 200aa    MW: 22404.2 Da    PI: 9.4885
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.44.5e-11152173122
                     ---SS-EEEEEEE--TT-SS-E CS
            WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                     ldDgy+WrKYGqK+vk+s +pr
  XP_023522211.1 152 LDDGYKWRKYGQKVVKNSLHPR 173
                     59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEGSQRSELP NYQLQVSFLS NAPNPQPIHE MGFLHFEDHN QVLSFLAPNN NAATPTTAPP  60
TTTTTTTTTT AMPSAFTTPP HAHLLTRPSW SNDQVGTLDP KPGGDENCTG STSDGTNSWW  120
RNSNADKTKV KVRRKLREPR FCFQTRSDVD VLDDGYKWRK YGQKVVKNSL HPRYHLISIL  180
LLIDTMILST LNLSSKLKPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131137KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.17e-31WRKY family protein