PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023521704.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HB-other

Protein Properties

Length: 501aa MW: 56027.8 Da PI: 7.3761

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023521704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.6e-19	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++q+ +Le+++++++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_023521704.1 22 KKRKLKTPTQVIALEKFYNEHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MEEELGNVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN EHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDLGSG LAQDSCGSTK NGDYWYIDPR 120 EVESQKPYGH ELATDNVLER RSQYTENVSN MDNTPSESSS SLKDRVLSQS ENPYDTEVSQ 180 YLTHEGAIPS SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPPLGVEF 240 QPLPPGAFES PAKGPIHDSY YTGNHPILPR SPEISTTKKQ RALGSRYEVH SSNMSSQDSY 300 MEEAVPTSAT CRPECHDKNS MNQLKKGSNY YNKTDPFPPQ NSPLNMYEES GGLTLSSSSK 360 RDHRINSSYN IPSSRTDSVS NNHGSCSSKV ANEQTEMQLH NHGCVGSKSF YRSGKTMAKE 420 MFNGEEKTVN GSSDPVRGKI LPTKDMAVAN RCPLDFPRSN YAAKSSFSGK PGRKNHARRS 480 TTEMLYSFTV DEAEDTSSSL D

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MEEELGNVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN EHKYPTEEMK SQLAEQLGLT  60
EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDLGSG LAQDSCGSTK NGDYWYIDPR  120
EVESQKPYGH ELATDNVLER RSQYTENVSN MDNTPSESSS SLKDRVLSQS ENPYDTEVSQ  180
YLTHEGAIPS SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPPLGVEF  240
QPLPPGAFES PAKGPIHDSY YTGNHPILPR SPEISTTKKQ RALGSRYEVH SSNMSSQDSY  300
MEEAVPTSAT CRPECHDKNS MNQLKKGSNY YNKTDPFPPQ NSPLNMYEES GGLTLSSSSK  360
RDHRINSSYN IPSSRTDSVS NNHGSCSSKV ANEQTEMQLH NHGCVGSKSF YRSGKTMAKE  420
MFNGEEKTVN GSSDPVRGKI LPTKDMAVAN RCPLDFPRSN YAAKSSFSGK PGRKNHARRS  480
TTEMLYSFTV DEAEDTSSSL D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-88	HB-other family protein