PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520936.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 218aa MW: 24847.5 Da PI: 9.3003 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.4 | 2.8e-19 | 66 | 120 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q + Lee F+ n++++ +++e LA++l+L+ rqV vWFqNrRa+ k XP_023520936.1 66 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSK 120 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 116.4 | 1.6e-37 | 66 | 154 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlsk+q++lLEesF+ +++L+p++K++la eL+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++e eeLr + XP_023520936.1 66 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELR-A 154 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MAIIPINSSN LDLSISMPGS SPSRPPFVGG CAVREFDMNR LPEVGDGEEE WAEEEEESYI 60 NDCKPRKKLR LSKDQSRLLE ESFRLNHTLN PKQKEALAME LKLKPRQVEV WFQNRRARSK 120 LKQTERECEY LKRWFGSLTE QNRRLRQELE ELRAMKVAPT AVVSAHGRQP PLPISAITMC 180 PRCERMSAST ITYSKGASSA STMPPEAFLS ALKLRQPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 70 | KPRKKLR |
2 | 115 | 123 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 1e-61 | HD-ZIP family protein |