PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520378.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 344aa MW: 37882.4 Da PI: 8.1905

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.8e-39	71	129	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ XP_023520378.1 71 QDPLRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRL 129 67899****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MLGNCDKMVL ISSSANQWPQ MKNHPTTSLD HDHHHHXHHQ KGLNNLMPSS SSGLVMDKQH 60 DQKTQLKQHQ QDPLRCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG 120 GGCRKNKRLK RPSSTTTTTT TTTTTTTTAA VTSPAPDSTS SSSTSCPNMF YASNSDLNVP 180 FSGYDLNPLG LGFCSPNIDH RDFNLNGFNS SSLLSGYSTL FAHNPSSSTS ISSLLASKFT 240 NGVGFKSTDP NLFGNNLASP AFGHHHQQQV DHVMGSNGGD QLGLNVKDVK LEDGMKRLNW 300 DDQQNQADEI ATQSNDHNPL YGNWSSQTWH DPENLASSIT SSLI

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MLGNCDKMVL ISSSANQWPQ MKNHPTTSLD HDHHHHXHHQ KGLNNLMPSS SSGLVMDKQH  60
DQKTQLKQHQ QDPLRCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG  120
GGCRKNKRLK RPSSTTTTTT TTTTTTTTAA VTSPAPDSTS SSSTSCPNMF YASNSDLNVP  180
FSGYDLNPLG LGFCSPNIDH RDFNLNGFNS SSLLSGYSTL FAHNPSSSTS ISSLLASKFT  240
NGVGFKSTDP NLFGNNLASP AFGHHHQQQV DHVMGSNGGD QLGLNVKDVK LEDGMKRLNW  300
DDQQNQADEI ATQSNDHNPL YGNWSSQTWH DPENLASSIT SSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	2e-34	Dof family protein