PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520377.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 345aa MW: 38037.8 Da PI: 8.1968

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.9e-39	72	130	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ XP_023520377.1 72 QDPLRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRL 130 67899****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MLGNCDKMVL ISSSANQWPQ MKNHPTTSLD HDHHHHHHHH QKGLNNLMPS SSSGLVMDKQ 60 HDQKTQLKQH QQDPLRCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV 120 GGGCRKNKRL KRPSSTTTTT TTTTTTTTTA AVTSPAPDST SSSSTSCPNM FYASNSDLNV 180 PFSGYDLNPL GLGFCSPNID HRDFNLNGFN SSSLLSGYST LFAHNPSSST SISSLLASKF 240 TNGVGFKSTD PNLFGNNLAS PAFGHHHQQQ VDHVMGSNGG DQLGLNVKDV KLEDGMKRLN 300 WDDQQNQADE IATQSNDHNP LYGNWSSQTW HDPENLASSI TSSLI

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MLGNCDKMVL ISSSANQWPQ MKNHPTTSLD HDHHHHHHHH QKGLNNLMPS SSSGLVMDKQ  60
HDQKTQLKQH QQDPLRCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV  120
GGGCRKNKRL KRPSSTTTTT TTTTTTTTTA AVTSPAPDST SSSSTSCPNM FYASNSDLNV  180
PFSGYDLNPL GLGFCSPNID HRDFNLNGFN SSSLLSGYST LFAHNPSSST SISSLLASKF  240
TNGVGFKSTD PNLFGNNLAS PAFGHHHQQQ VDHVMGSNGG DQLGLNVKDV KLEDGMKRLN  300
WDDQQNQADE IATQSNDHNP LYGNWSSQTW HDPENLASSI TSSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	2e-34	Dof family protein