PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520291.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 327aa MW: 37185.1 Da PI: 8.6528

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.4	1.5e-07	174	196	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F+r nL+ H+r H XP_023520291.1 174 HYCQICGKGFKRDANLRMHMRAH 196 68*******************99 PP
2	zf-C2H2	11.7	0.00079	265	288	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_023520291.1 265 YVCKLCSgKKFSVLSDLRTHEKHC 288 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MNSNSHMPFS SDFHSTSLLY NLSILKDKLH QIQSVVSLVV YDFQNSTESL PRDLSQLPTV 60 NSLIQELIMA ASSMLFTCQE MNNFAVNSSL HNDVVDNNLQ GLVDNDNRPS IALLDVANDH 120 RHHQNWYNMT STTNNDDNDN NSSRVTTTKT TQDYRTTIDI VELDATDLLA KYTHYCQICG 180 KGFKRDANLR MHMRAHGDEY KASGALSNPE KSHRRDMNIN KKLGTKYSCP QEGCRWNQKH 240 AKFQPLKSLI CVKNHYKRTH CPKMYVCKLC SGKKFSVLSD LRTHEKHCGD MKWVCSCGTT 300 FYRKDKLMGH VALFVGHAPA ISSSVRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-103	C2H2 family protein