PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520257.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 270aa    MW: 29148.2 Da    PI: 5.026
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.84.5e-2373127259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr    C+s+ gCp++k+ver++ dp+++ itY+ eHnh+
  XP_023520257.1  73 SDSWAWRKYGQKPIKGSPYPR----CSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 127
                     69****************996....99888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDDVTFNNNH QFYSVDLLED SDGFKAAPAS PPPPNSTAAA AKKGRRGMKK KVVSVRINGD  60
GPRNSSGSTT PPSDSWAWRK YGQKPIKGSP YPRCSSSKGC PARKQVERNR LDPTMLLITY  120
SCEHNHSGPV SRNNNHNQAA AIAAVKPTSP ETVPVHPEPE PEPEAEEKFV ESLEDQFSWF  180
GEMETTSSTV LETSIFSGRS SSGVGDSISS DVAMPFPMGD DDVDDSLFAD LGELPECSVV  240
FRHGGGPGLP VDEQPPTTQR RITPWCGATT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.17e-52WRKY family protein