PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520046.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 327aa MW: 36426.1 Da PI: 7.4973

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30	9.5e-10	154	201	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq XP_023520046.1 154 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 201 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAAFSYQYQP ILLDSMFFPN NPFKMGGFLD DPNFNTIQEQ QQQPIYHFAD ISNQTPESST 60 LVDRSDSADP PAVTVTVTSP CSKKRKSRNT SSATSAQSKE STGKKQKSKG ELDEHKEEDP 120 KPKNGKKEEK NVSDGAATKG YIHVRARRGQ ATDSHSLAER VRREKISERM KTLQRLVPGC 180 DKVTGKALML DEIINYVQSL QNQVEFLSMK LASLNPIFFD FRMDLDGLMI QPETPSLSSI 240 TPQLPAMAQC SRAVIDTTPP TTQTPPVSAP NNYPLMDPSA NNMFLMSPAA YSPSSQDYVK 300 VSSWDVEEQK RKLLISSGIG DNLCYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	109	KKRKSRNTSSATSAQSKESTGKKQKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	3e-55	bHLH family protein