PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519228.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 324aa MW: 36333.4 Da PI: 8.2577

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.3e-31	159	212	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rF++ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023519228.1 159 PRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 212 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.4e-15	160	211	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++++av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023519228.1 160 RMRWTSSLHARFIRAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 211 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MLEKGILVPD LSLQISPPIT DPSSSFHIWK QPQVPQVDTE LSLSNNSTVA VDVSPDRFQP 60 IRGIPLYSNG LLSSSTYLNQ NQPSPSQPPL NSRAFYQQPP VGRYNGITME ALRNHQQNQN 120 QFGFHNHQSL QFGVSDFSCN DRSRSFMPRI QSRRNARAPR MRWTSSLHAR FIRAVELLGG 180 HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTDKQT ASSEGSGEED FLPATPTPHH 240 EASCLLNHRR GFSASLEADV NGSAPSINNH CNSSRRAWEQ ASPTRSNMFG SQNQPQECYE 300 LGHPGLNLND SPSKDLCSRH NWDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-44	G2-like family protein