PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518671.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 459aa MW: 50001.1 Da PI: 6.2855

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.5e-31	231	289	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_023518671.1 231 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 289 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MCSLFEMENL QGDLTDIVRG SRTNFGCKTE DPFSSDWIFS SEMPMNFSSS SSSSSSSSSS 60 SSSSSSSSSQ LQDQAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLH GGGNLEDKSG 120 CGGSVFVGED EVMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCDSPLLI PNCNSPFIPP 180 INSDLHPSAL QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG 240 QKPIKGSPYP RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS 300 SRSQQSKNNT PNSSTLSSAS LPQKPTTAPE GPQNNNQHPN NNDNNGARSS ATSNHVKQEP 360 PQEIQKPFAT EAEGFPYREA MAMAMAVHHN QSDDFFADLE ELGTDPSNLL FTQPQQLHQT 420 QGSGGLDDVV AFNNLFDWAA EDNNHSFQEP PTGSKRGFY

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MCSLFEMENL QGDLTDIVRG SRTNFGCKTE DPFSSDWIFS SEMPMNFSSS SSSSSSSSSS  60
SSSSSSSSSQ LQDQAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLH GGGNLEDKSG  120
CGGSVFVGED EVMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCDSPLLI PNCNSPFIPP  180
INSDLHPSAL QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG  240
QKPIKGSPYP RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS  300
SRSQQSKNNT PNSSTLSSAS LPQKPTTAPE GPQNNNQHPN NNDNNGARSS ATSNHVKQEP  360
PQEIQKPFAT EAEGFPYREA MAMAMAVHHN QSDDFFADLE ELGTDPSNLL FTQPQQLHQT  420
QGSGGLDDVV AFNNLFDWAA EDNNHSFQEP PTGSKRGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-76	WRKY family protein