PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 209aa MW: 22258 Da PI: 6.8666 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 108.7 | 8.7e-34 | 52 | 135 | 5 | 88 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 +++ ++hTkv+gR+RRvR++a+ca r+F+L+ eLG+ +d++tieWLl+qa+p+i+++tgt++ +a +++ss+ ++s++s + XP_023518605.1 52 SSSSRDRHTKVNGRGRRVRMPALCASRIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSVMASSAPSVA 135 56889********************************************************99999666666666666655544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MVSEILPHKF PSSSDPHSQP TASHSLAVAT DSSLPNTTQP VVHRKSSTAL SSSSSRDRHT 60 KVNGRGRRVR MPALCASRIF QLTCELGHRS DGETIEWLLR QAEPSIIAAT GTGTVPAAPI 120 STVSSVMASS APSVACRVQP VAVAAAGGQG MFGMPPPSCR LNLCQPAGMD YSNGGDDYRY 180 MPFTALLLQP ATADEAEERH EAEEIFREQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 2e-30 | TCP family protein |