PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518599.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 219aa    MW: 24622.9 Da    PI: 7.9481
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.51.2e-20119153135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_023518599.1 119 CANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEER 153
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MMQRCGSYQC YSAGECSCEA AFYGQQTTFF SMPAYNNNYY ESQHYSFQSS SPVVDCTLSL  60
GTPSTRMTEF DEKRREEQQS ASNFAWDLSR TKHPPSSKSG RRGGDKSSSN ADQMLARHCA  120
NCDTTTTPLW RNGPSGPKSL CNACGIRYKK EERKAASSGQ QASSMYRNET SSWLQHHSHS  180
QRTPRFTHGI GNDMNPGVAI LSWSLNDTEQ PQLYYDFTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.19e-41GATA family protein