PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518391.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

SRS

Protein Properties

Length: 288aa MW: 31487.7 Da PI: 7.5247

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	105.5	9.1e-33	95	160	3	68
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaa 68 g++sCqdCGnqakkdC+h+RCR CC++rgf C+thvkstWvpaakrr+rqq+laa++++ +++++ XP_023518391.1 95 GGGISCQDCGNQAKKDCTHMRCRSCCNTRGFPCQTHVKSTWVPAAKRRQRQQKLAALQTHPKRHTD 160 5789*****************************************************999887764 PP
2	DUF702	88	2.2e-27	165	225	93	154
DUF702 93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ +++ le+ ++P+e++s+avfrcvr+ss dd ++++aYqtav+igGhvfkGiLydqG+e+ XP_023518391.1 165 TT-NTSGLEIGNFPAELNSPAVFRCVRLSSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN 225 44.455889999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSMSGFFTLG STDQEHQQPD TNRPNQTLPP DTLFWYKPGS VELWQPQQHQ QHQQHQQQSL 60 FQTRSHNNNN NNNLYSDESS SRSGNLMMIS SGSGGGGISC QDCGNQAKKD CTHMRCRSCC 120 NTRGFPCQTH VKSTWVPAAK RRQRQQKLAA LQTHPKRHTD YNIPTTNTSG LEIGNFPAEL 180 NSPAVFRCVR LSSTDDTDDQ YAYQTAVNIG GHVFKGILYD QGPENNYVPG ETSSGGGGGL 240 QPLNFIAGAA DANAASSAAL PLLDPSSLYS APLNSFMAGT QFFLPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-42	SRS family protein