PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 296aa MW: 33047.3 Da PI: 7.7265 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63 | 4.4e-20 | 27 | 88 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+++ r psa+++++++++l +++ ++V++WFqN++a+e++ XP_023518147.1 27 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88 58****************98678*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.4 | 5.5e-37 | 26 | 90 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023518147.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90 789***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MDHQKAAAQG SEEGSNGKGG FVCRQSSTRW TPTTDQIRIL KELYYNNGVR SPSADQIQRI 60 SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTSSASDHL HHHQQQQQIP VPKQQQQQQQ 120 QLQSSLISSK PEDSSSSPLF HTKYPPTPSS SVMVAVGHMG NYGYGSTTFE NSFRECSISS 180 GGSSSMVGSR RSHHMGSWIG VDPYSSPASA AATVFEKTKY VEESMEDEEQ EIETLPLFPI 240 HDDRSLGGFC SMKPKYSDGY YTTTWYGRSD DGATGSRTSL ELSLNSYAAI SPDDAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 4e-42 | WOX family protein |