PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARF | ||||||||
Protein Properties | Length: 723aa MW: 78850.4 Da PI: 7.5928 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.8 | 1e-23 | 151 | 252 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d+ g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_023517845.1 151 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLLGIKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFL--RGND 242 99****************************963.3445679************************************************..4489 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_023517845.1 243 GELRLGIRRA 252 999****996 PP | |||||||
2 | Auxin_resp | 105.2 | 7.9e-35 | 278 | 358 | 2 | 82 |
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+s+k+ F+v+YnPra++s+Fv +++k++k++++++s+GmRf ++fet+d++ rr++G ++gv d+dp+rWp+S+WrsL XP_023517845.1 278 FNAISSKTSFSVYYNPRATSSQFVLPFHKFLKSINHSFSAGMRFSLSFETDDAADRRCTGRITGVGDVDPIRWPGSRWRSL 358 689****************************************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 723 aa Download sequence |
MAALIDLNTT EEDDAPSSAA SSASSSSASA LTSSPSPSLT SSICLELWHA CAGPLTSLPN 60 KGSLVVYFPQ GHLEQMQEFP ATAAYDLPPH ILCRVIDVQL HAEAGSDEVY AQVSLFPENE 120 PIEHKMQEEM TNDSEGEDFE GSEKTTTPHM FCKTLTASDT STHGGFSVPR RAAEDCFPPL 180 DYSQQRPSQE LVAKDLLGIK WKFRHIYRGQ PRRHLLTTGW SAFVNKKRLV SGDAVLFLRG 240 NDGELRLGIR RAAQLKSGSP FSNICSQQLN SSSIMDVFNA ISSKTSFSVY YNPRATSSQF 300 VLPFHKFLKS INHSFSAGMR FSLSFETDDA ADRRCTGRIT GVGDVDPIRW PGSRWRSLVV 360 RWDDVETKRH GRVSPWEIEP SGSVSVASNV VPPGLKRTRI GLSPTELEFP VPNGIGASDF 420 GESLRFQKVL QGQEILGYST PIDGDDNIRH PPEKRRSFPG LLGSGIALMR NGPRIPVTNS 480 ETSSRGFMFD ESFQFHKVLQ GQEMYPSPFF GIATATNEVK ASGGYGPVDS VPLSRSKDGW 540 PMTMQSENFL TRSSIPSVQV SSPSSVFMFQ QSMVPVPSFN SYNRGNFTEQ RTMNKSTSHN 600 SGTAFMTDHN SSTEVPQGMR PTSLGVQKQL GLSHPSTTEP AFTGNKAGCR LFGFSLTEGK 660 NVGNTTDKAS PATTPINAGT TSVLSSNSGL RCPLKSPLMN KVVGSNCTKG AVQYHFANCS 720 TYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33860.1 | 0.0 | ARF family protein |