PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517841.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 308aa MW: 33734.7 Da PI: 7.6647

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.5	7e-34	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_023517841.1 31 KQRLRWTNDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 85 79****************************************************8 PP
2	Myb_DNA-binding	60.5	3.5e-19	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++e++v+av+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_023517841.1 33 RLRWTNDLHERFVNAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 84 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MFQQQRAHNS SLMEPTNGSN GNSNTSNSAS KQRLRWTNDL HERFVNAVAQ LGGPDRATPK 60 GVLRVMGVQG LTIYHVKSHL QKYRLAKYVP DSSSNGKKAD EKDSGDILSN IDGSSGMQIT 120 EALKLQMEVQ KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQKLSGVLSA APVASPLSAP 180 VSGDNCPETD KNDPSTPVPT SESPRQEKAS KESARAKSIS IDDSFPSHHE PLTPDSGCHG 240 SLDDSPRPVK KPRQYRDGAC AKSEMMLAQQ ILESSLNSTP KESRPVSLAR ETIDPLSGMS 300 IGDDDRLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-98	G2-like family protein