PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517418.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 743aa    MW: 81674.8 Da    PI: 6.8433
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.12.7e-07194214425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++C+f+a+ G+C  G++C+F H
  XP_023517418.1 194 AICDFYAK-GWCIKGSSCSFLH 214
                     68******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 743 aa     Download sequence    
MDAKRHDKHL RSDTITTTES SEVKKLSSVG GTESNGNIEF ARLSGEPLTK LVEQSHGECT  60
KVESRKCPKD KETEDQELTV GDKDVEALRN NLPKDSGGSI YNSKVPLCNR GIISAKVSNG  120
LSVTVEDSDI GLENHLVGGN LGSTNPERES TQMDLQLENG KNQMASRSAA SKKRTRKLSH  180
GADVNIEQKR PAAAICDFYA KGWCIKGSSC SFLHIKDNAI GSDQHSEEHA GAAYLKRQVQ  240
PNQAGLQYSA DASKSPVFHH LPNSSFLKDS SLSLKFGISS ERTLPRDFTE SKGWDVLHEK  300
NKFLLHQRED SLLSELPDCQ KLPSTSFDVS FPLNREGSTA RNEQPPEFGP SSGGFAKLSV  360
MEEPANVACP RLLNDYHSPV LRSSLNSNTT LTKGGILSSR FTTSNDSFPF TPSSSASFFG  420
AQKMSIIDGE HRVSMPASSF MRSSPFSPSE SDNSLINASM NSSDYKTKYS CDDWEPSEPF  480
RPSFFIPSIN TASQYDPFLD SIELPRKVGG CHNVSLDRQG HEEVSPLSTL HRASGNFMVP  540
GSSKPELNDD TSSLSSHNKA EDKNEKAGHV EGTDSLMFEA EIQGSSGIDG CNGSRTREDD  600
HMGLSREKNV PKKMKTDTDG EIKLSNIAFH EKESEAESDR QLGDMDGKHL IDGNVHKESK  660
ATRHFRSALI ELVKGILRPK WREGHLKKDV HNTVVKKTLD KVLGTLQPFQ VPTTVESVKQ  720
YLSSSRPKIE KLVEGYVSKY GKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.17e-33C3H family protein