PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517397.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 621aa MW: 67051.1 Da PI: 7.0586

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.4e-31	347	405	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023517397.1 347 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 405 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MDKGWGLTLR DSDHSIGFFS NKPPPSTVNS FHSVMFQGID FPGKLGRTDD DKPALPLPDH 60 TRLAVNEVDF FSDKKRVVDD REDEDSKPPV HIIASAVNKD HNNFTAPTTA FNRVNTGLHL 120 LTANTGSDQS TVDDGISSDG EDKRAKNELA QLQVELQRMN AENHKLRDML SHVRNNYTTL 180 QMHISTFMQQ QQQQQQQQNQ ALESAHERQP TEKHDQVGKV VIPRQFMDLG PSGKTGEGDH 240 ELFHSSSDER TGSGSPLNNT ETASKKSTGR DQEMGPSDQE NSNLRSDGKR SMGREESPES 300 ESHGWGGPNK APRLNSASKP LDQQSTEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA 360 KGNPCPRAYY RCTMAVGCPV RKQVQRCAED TTILITTYEG NHNHPLPPAA MAMASTTTAA 420 ASMLLSGSMS SADHNLMNPN LLARAILPCS SSMATISASA PFPTITLDLT HTPNPLQFQR 480 PAPTPFHVPF EAGQPPSAAA QLPQVLGQAL YNQSKFSGLQ LSHDMGANSS HLGHHQISQP 540 TVASSQPSGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGAHSNNNN TTPTNTTSTS 600 NNNGSSNNNT NNTKISSFPG K

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MDKGWGLTLR DSDHSIGFFS NKPPPSTVNS FHSVMFQGID FPGKLGRTDD DKPALPLPDH  60
TRLAVNEVDF FSDKKRVVDD REDEDSKPPV HIIASAVNKD HNNFTAPTTA FNRVNTGLHL  120
LTANTGSDQS TVDDGISSDG EDKRAKNELA QLQVELQRMN AENHKLRDML SHVRNNYTTL  180
QMHISTFMQQ QQQQQQQQNQ ALESAHERQP TEKHDQVGKV VIPRQFMDLG PSGKTGEGDH  240
ELFHSSSDER TGSGSPLNNT ETASKKSTGR DQEMGPSDQE NSNLRSDGKR SMGREESPES  300
ESHGWGGPNK APRLNSASKP LDQQSTEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMAVGCPV RKQVQRCAED TTILITTYEG NHNHPLPPAA MAMASTTTAA  420
ASMLLSGSMS SADHNLMNPN LLARAILPCS SSMATISASA PFPTITLDLT HTPNPLQFQR  480
PAPTPFHVPF EAGQPPSAAA QLPQVLGQAL YNQSKFSGLQ LSHDMGANSS HLGHHQISQP  540
TVASSQPSGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGAHSNNNN TTPTNTTSTS  600
NNNGSSNNNT NNTKISSFPG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-135	WRKY family protein