PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517357.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 247aa    MW: 27051.2 Da    PI: 9.185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a+++a++ ++g
  XP_023517357.1 21 HFRGVRKRP-WGRYAAEIRDPCK---KSRVWLGTFDTAEEAARAYDNAARGFRG 70
                    69*******.**********854...5**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MAPRDKAVPV KPNVGNLKEV HFRGVRKRPW GRYAAEIRDP CKKSRVWLGT FDTAEEAARA  60
YDNAARGFRG AKAKTNFPLP SDDLLNLNNK INNNNQSPSQ SSTVESSSRE QALMVDSSPL  120
NHNLGHGISG LAANGAITFP FHRYQIPVIG DALLPRAMPP SNHVLCFDAA LRAGVIKSHP  180
HHQNQRLRFD HHHEAVSNFL RDFGSGGGVQ SDSDSSSVVD MNSQDMEPRR VGGGVDFDLN  240
FPPPESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-27ERF family protein