PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 371aa MW: 42440 Da PI: 6.6582 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.0005 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_023517086.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP | |||||||
2 | zf-C2H2 | 16.4 | 2.5e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_023517086.1 106 YVCHydGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 21.7 | 5.3e-07 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_023517086.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP | |||||||
4 | zf-C2H2 | 16.6 | 2.2e-05 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk+F + + Lk+H +H XP_023517086.1 166 HICPfpDCGKRFAHEYKLKNHVTSH 190 679999****************995 PP | |||||||
5 | zf-C2H2 | 11.2 | 0.0012 | 229 | 254 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C k + + + Lk H+++ H XP_023517086.1 229 HACPyeGCEKAYIHEYKLKLHLKReH 254 579999*****************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
METHFNHNLF DRRPIRKNTN SSVKWIKEWV PQDVVATGGK CFLFKWVTED TLKALQEKSK 60 QSEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY DGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPF PDCGKRFAHE 180 YKLKNHVTSH HEKNATAEVV KYTPPFEKQT KASKPSGGAS ASASSDRPHA CPYEGCEKAY 240 IHEYKLKLHL KREHPGHFVE DNGNAPHNGE NEIEASDQDG YGGKRVNVKN QKRNRPKPNL 300 KLPPSKVAQR KGATPSPAPM SAAVKKSWRV KEENYEEEEE DSEETEEDRE NVEGWGYAEN 360 EDDDEETEYE D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-142 | C2H2 family protein |