PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023516925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 217aa MW: 24211.2 Da PI: 7.0157 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.9 | 1.2e-33 | 4 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Pt+eelv eyLk kv + +l++ ++i+e+ +++++Pwd+p + ++++y Fsk+++ +r+ r sgyWka+g++++++ XP_023516925.1 4 LPPGFRFEPTEEELVFEYLKCKVFSFPLPA-SIIPEIttSVCNLDPWDIPGG-GNWQEDTYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 92 79***************************9.789988667**********43.3456789***998775....48899999************** PP NAM 94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128 s+++ + vg++ktLvf+ g++++ +kt Wvmheyrl XP_023516925.1 93 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 129 *844435559*********998877.8*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MRGLPPGFRF EPTEEELVFE YLKCKVFSFP LPASIIPEIT TSVCNLDPWD IPGGGNWQED 60 TYLFSKNQEC DRRVRWSPSG YWKAKGSERK IVSSSSDAVG LVGMRKTLVF WMGSSSSRKT 120 GWVMHEYRLL LSPSQTPTPP SVVINNMEKW VVCRIFCNNS GIKNDLHFHP LQYPVSASTN 180 DDTNALSDDS VSSTASSSSF SATTTMPFPN HHSSASN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-38 | NAC family protein |