PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516654.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 239aa    MW: 25903.9 Da    PI: 10.9386
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-19103136134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_023516654.1 103 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 136
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSHLLTPRPS SPSPLRPILP PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP  60
DHSNSDDPRR LQLKHEMIHG ARNSHDLNRT TMLNDGAAII RTCSDCNTTK TPLWRSGPRG  120
PKSLCNACGI RQRKARRAMA EAAAVNGGIP CGGKSAAIIL KTNKTVQHKI MTKPAAKKLK  180
RKRKDDVVVA GGGKKGCFED IKIGRRLSEI SSSYRRVFPQ DETDAAILLM TLSYGLLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-17GATA family protein