PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516653.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 254aa    MW: 27584.8 Da    PI: 11.0227
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-19118151134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_023516653.1 118 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 151
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSHLLTPRPS SPSPLRPILP PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP  60
DHSNSDDPRR LQLKHEIRLL INSNQINTAT QMIHGARNSH DLNRTTMLND GAAIIRTCSD  120
CNTTKTPLWR SGPRGPKSLC NACGIRQRKA RRAMAEAAAV NGGIPCGGKS AAIILKTNKT  180
VQHKIMTKPA AKKLKRKRKD DVVVAGGGKK GCFEDIKIGR RLSEISSSYR RVFPQDETDA  240
AILLMTLSYG LLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-17GATA family protein