PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023516652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GATA | ||||||||
Protein Properties | Length: 255aa MW: 27662.7 Da PI: 10.5058 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.8 | 1.7e-19 | 119 | 152 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk + XP_023516652.1 119 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 152 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MSHLLTPRPS SPSPLRPILP PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP 60 DHSNSDDPRR LQLKHESESS SCCENHNTHN DLMIHGARNS HDLNRTTMLN DGAAIIRTCS 120 DCNTTKTPLW RSGPRGPKSL CNACGIRQRK ARRAMAEAAA VNGGIPCGGK SAAIILKTNK 180 TVQHKIMTKP AAKKLKRKRK DDVVVAGGGK KGCFEDIKIG RRLSEISSSY RRVFPQDETD 240 AAILLMTLSY GLLLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 9e-18 | GATA family protein |