PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516180.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 279aa MW: 29751.4 Da PI: 9.8595

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.8	1.6e-37	50	136	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a+ s s+ s + XP_023516180.1 50 APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDPDTSVS 136 789******************************************************************887555554444433333 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MAEHNNKKPS AAAAAAPPPP SSPAPTPPSS DIIIANPNKD QNKKHQQQLA PKRTSNKDRH 60 KKVDGRGRRI RMPALCAARV FQLTRELGHK TDGETIQWLL QQAEPSIIAA TGSGTIPASA 120 LHAAGVSLSD PDTSVSASAT LTPKIDAVPR LNWAMMGANL NRSHMGTPGF WPSLGGIGPG 180 FVSENPGSIM PKFGFHGFEF QGMNLGSVNF PTIIGNQQPQ QQIPGLELGL SQEGNNVRGM 240 LNPPSYSQIY HQIGQSRDPS AAALEQDQAP DKDNSQESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-54	TCP family protein