PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 371aa MW: 41600.1 Da PI: 7.8051 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178 | 2.6e-55 | 35 | 161 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + ++++ ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdk++++ XP_023515474.1 35 LPPGFRFHPTDEELISHYLFHKVMDCSFSC-RAIGDVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKDIYR- 127 79****************************.89***************888999****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy+grapkgek++Wvmheyrle XP_023515474.1 128 GKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 161 999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MNTSKPSNMP ANMPAAAAAA APGGGVLNQE DHLELPPGFR FHPTDEELIS HYLFHKVMDC 60 SFSCRAIGDV DLNKSEPWDL PWKAKMGEKE WYFFCVRDRK YPTGLRTNRA TEAGYWKATG 120 KDKDIYRGKS LVGMKKTLVF YRGRAPKGEK SNWVMHEYRL EGKLSALNLP KAARNEWVIC 180 RVFEKNSTGK KVDISGNEFG HSNLPPLTDS FSFDGETKCA VQLPNNVPCF SIAMDSQRKL 240 QPMASSYNSS VFSVIPNSIN SFPRNPHSNS VFPPPNQTPN LQFPSALLLQ EQQSLLRALI 300 QNVNGGNIRE SFKPETDKIS ISQETCLTTD VNNEISSILP NHEMGRRPLD NSQEAPPAPM 360 APIDLDDFWN Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-127 | NAC family protein |