PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515412.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 500aa MW: 56225.5 Da PI: 8.6971 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00041 | 410 | 432 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C k+F + L H r+H XP_023515412.1 410 HKCPICEKVFASGQALGGHKRSH 432 79*****************9999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MEANLASRHV CKLCNKSFAC GRSLGGHMRS HLTNNLVDSD EKHSRTSLQF ADFSAGSVSN 60 MEEEEEVDLE GGNLAGFGYG LRKNPKKTQK LEFLSEESSL QDKFCRECGK GFQSWKALFG 120 HMKCHSERVV SSSQELEEPD SHITDAKQKL VMDIQSDNEI EAPNNKRKRS RRRRTAQMGT 180 ENSTTSFSFA TDSSVFEIQQ EQEVAISLML LSMDVGNWVG FNSPVESSDN NSKFLDTPSA 240 VERKTSVSNK LKVKKMESEV KKPEQSCSAF MNKGKMIDQR GGSKSFPPKN DQNQARFSSD 300 MIAKSGKKTL AEFWDSKICK KPKKRSKFEC DICNKIFHSY QALGGHRASH KKLKGCFVES 360 AMEEYEEEEI DSERSAEMAI SAYPTAENKL SKGLNNGEMG YQIPKKSSKH KCPICEKVFA 420 SGQALGGHKR SHLISGFKNR ATIQIQKQVP EIRRFLDLNL PPEPVEIENK NHNLASLKHP 480 WWAAANEHKH EALVNVGFHI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 320 | 354 | KKPKKRSKFECDICNKIFHSYQALGGHRASHKKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 2e-30 | C2H2 family protein |