PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515272.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 341aa MW: 36493.8 Da PI: 7.6704 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 119.5 | 4.1e-37 | 74 | 175 | 2 | 102 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaesssssasnsssg 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++++a ++ + +ss++ XP_023515272.1 74 PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMsvngtlkiP-------TTTSSNQ 161 5799************************************************************99999444422223321.......2222222 PP TCP 89 kaaksaakskksqk 102 ++a ++ +k++++ XP_023515272.1 162 DSADQSVGKKRRKR 175 22222222222221 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MADIQKQEYN DDDDEDSPVT DLRMNDSDSS RMDLLALAPK QEDPDDSHDS DLPPSQIQVV 60 NFAPEIAKTV SVLPPKRAST KDRHTKVEGR GRRIRIPATC AARIFQLTRE LGHKSDGETI 120 RWLLERAEPA IIAATGTGTI PAIAMSVNGT LKIPTTTSSN QDSADQSVGK KRRKRPANSD 180 YVDVNDAVSV SVSNGVVHSG TSTTAAVQQA LPPGFVPVWA IPSNAIIPGA VFMVPSVACS 240 STRPQLFSFP APGAPLVNTT ARPISTVVSK ADTSHIQSST TNQSSSSSSA STSKSESVMA 300 PISSSTVPTS SKTTTRMLRD FSLEIYDKKE LQFMSRSASK H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 174 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 6e-55 | TCP family protein |