PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515134.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 309aa    MW: 34896.5 Da    PI: 9.9229
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.51.3e-39761942129
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesssssasnsssgkaaks 93 
                      g+kdrhski+T++g+RdRR+Rls+e+a+rfFdLqd+LGfdk+skt+eWL++++  aikel +    +++s++    ++ + ++s          
  XP_023515134.1  76 SGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELKEKfllEANSSE----STLVRNVS---------L 157
                     579*************************************************************555222221....12222222.........2 PP

             TCP  94 aa.kskksqksaasalnlakesrakarararertrek 129
                        ++ ++ k+  + + ++kesr kararar rt+ k
  XP_023515134.1 158 YRdQEVPRGKKRRKLRIVDKESRFKARARARARTKAK 194
                     22133334444444567899**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MLASSIDNSI QIHDERFQQT IDCYNFNPFL DDHDFIFGHI LYPEIGLGSA NNTSNDTTTA  60
HKASSQDNPI SRKRSSGAKD RHSKICTSKG PRDRRMRLSL EIARRFFDLQ DMLGFDKASK  120
TVEWLFTKSR SAIKELKEKF LLEANSSEST LVRNVSLYRD QEVPRGKKRR KLRIVDKESR  180
FKARARARAR TKAKLIRGRF EISKSNFEGN PVGVCKMEDV IEESSTKSKS VANFPQNLGS  240
KAKNSASLIS NHCYDKRVSK ESCSEEIHLL PGSSMDMGTL SLDTMRASPA GLKLSELDEV  300
DGVLIFYGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167171KKRRK
2167194KKRRKLRIVDKESRFKARARARARTKAK
3168195KKRRKLRIVDKESRFKARARARARTKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-31TCP family protein