PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514934.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 306aa    MW: 33216.1 Da    PI: 6.1639
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-18215248134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR gp g+ktLCnaCG++y++ +
  XP_023514934.1 215 CLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGR 248
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MIGETFSDEM DCGNFFDQID DLLDFPTEDF DDHGALTTNA AAFPPIWSSA SLPHAADSVF  60
SGDTHHSALS VPYEDIDQLE WLSNFIDDSS SGAETLTINT SSLSPANQFQ ISSPVSVLDS  120
SSSSSSSCSG EKKTLAVAGK RGRARSKRSR PPSFIPRPPQ LISPTNSGGK VSSDSENYGE  180
SCSAPPPLVK KTKKIKLSFR RDQNDAFSPQ GVRKCLHCEV TKTPQWRAGP LGPKTLCNAC  240
GVRYKSGRLF PEYRPAASPT FVPCLHSNSH RKVLEMRTKQ EEIAVETELP TELIPNTNSG  300
IVLGYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-41GATA family protein