PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514922.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 578aa MW: 62759.9 Da PI: 6.8978

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.3	4.9e-16	282	321	3	42
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +k+CnCkkskClk+YCeCfaag++C + C+C++C+N+ ++ XP_023514922.1 282 CKRCNCKKSKCLKLYCECFAAGVYCIDPCSCQECFNQPKH 321 89**********************************9875 PP
2	TCR	45.7	1.3e-14	366	405	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ lkkYCeC++ g+ Cs +C+Ce+CkN+ XP_023514922.1 366 RHKRGCNCKKSSYLKKYCECYQGGVGCSINCRCEGCKNTF 405 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MDSTPNKKPT TNPPPPPPPL PKFEDSPVFN FINSLSPIKP LKSIHITQTF NSISFPSLPV 60 FTSPKRPNFP NPSRSSPPVS SNEGAVIIMD QLLEIFVPEI PTADDASTHG MQPPETVNPD 120 AGEVGISSEV MELGSDEAED ENCDSFGNKP LLNLQSGNMP RRCLDFEMAG TPNTAATATA 180 GGDGSIRGSS SSSSSFRCTL PGIGLHLNAI AATLKHENLS HPSSSASISS PNSIRDQPLM 240 ASSATEIENP CHEPANLNGE NLNLINPKKN GTLMENAEIG ACKRCNCKKS KCLKLYCECF 300 AAGVYCIDPC SCQECFNQPK HEAMVLETRR QIESRNPLAF APKVIMNSDS FSELGDDSNK 360 TPASARHKRG CNCKKSSYLK KYCECYQGGV GCSINCRCEG CKNTFGRKDE SAVIETDTKQ 420 EEEGREHCLK TAEVQKDEDQ QNPNSAVPST PLGRCRSLIP LPFQLKRKLP SFIDDESSYR 480 LSVRFKLEKQ GIIQTETKFE KTPSADVMPE TICNGCSSSI GVVKSVSPNS KRVTLPPPQG 540 DFRPLPSTRI GRKLILQSIP SFPSLTNLNS RVNGTSEL

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MDSTPNKKPT TNPPPPPPPL PKFEDSPVFN FINSLSPIKP LKSIHITQTF NSISFPSLPV  60
FTSPKRPNFP NPSRSSPPVS SNEGAVIIMD QLLEIFVPEI PTADDASTHG MQPPETVNPD  120
AGEVGISSEV MELGSDEAED ENCDSFGNKP LLNLQSGNMP RRCLDFEMAG TPNTAATATA  180
GGDGSIRGSS SSSSSFRCTL PGIGLHLNAI AATLKHENLS HPSSSASISS PNSIRDQPLM  240
ASSATEIENP CHEPANLNGE NLNLINPKKN GTLMENAEIG ACKRCNCKKS KCLKLYCECF  300
AAGVYCIDPC SCQECFNQPK HEAMVLETRR QIESRNPLAF APKVIMNSDS FSELGDDSNK  360
TPASARHKRG CNCKKSSYLK KYCECYQGGV GCSINCRCEG CKNTFGRKDE SAVIETDTKQ  420
EEEGREHCLK TAEVQKDEDQ QNPNSAVPST PLGRCRSLIP LPFQLKRKLP SFIDDESSYR  480
LSVRFKLEKQ GIIQTETKFE KTPSADVMPE TICNGCSSSI GVVKSVSPNS KRVTLPPPQG  540
DFRPLPSTRI GRKLILQSIP SFPSLTNLNS RVNGTSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-106	CPP family protein