PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514550.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 454aa MW: 51592.4 Da PI: 5.6787

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	49.1	1.2e-15	112	167	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelm..kvkgLtlehvkSHLQkYRl 55 k+rl WtpeLH++F+e +q ++k +Pk+ile m k + +t+e+v+SHLQk+Rl XP_023514550.1 112 KERLIWTPELHQCFLEYYNQS-SNQKRVPKKILEEMrrKFPYVTRENVASHLQKHRL 167 68****************9.89999*****333568************8 PP
2	Myb_DNA-binding	24	9e-08	114	166	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg...kgRtlkqcksrwqkyl 48 r+ WT+e+++ ++++ +q + +k+I ++m t++++ s++qk++ XP_023514550.1 114 RLIWTPELHQCFLEYYNQSSNQkrVPKKILEEMRrkfPYVTRENVASHLQKHR 166 667***************9999******9996669999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MDGNNGWGRD DGIVMILPDF SDDVPSDGFD VHGGGADYIV QPTAPNQPSK DNPSFVSADV 60 NPVGVPHSSG DVDGRVGILP VIDDRTRRNS SLNAKSSKKK NGYYHRRNGE KKERLIWTPE 120 LHQCFLEYYN QSSNQKRVPK KILEEMRRKF PYVTRENVAS HLQKHRLYLK HSNNKEEEKL 180 SKPSTKSVPR KQINEESNIH QILNNTAIST CPNAILPHQS HSISINPNTQ PPLQTHTLQE 240 PMQNQVFSQF DDTHLIEQDI VLMPSSFDPW NDLPYSNTMN VIDPFGGQSS NAASCLPVMV 300 DNFTPPMLSY HQLVISNIDG NGYGNDNGNS FHPMMGNTFG GLSINNYSNG ALPNTVDYNM 360 NYQLDNVQFH DINDIYALGN YPDSLQFDYP LNFNFQNELQ VQDFDQAVQS MLYPPATHLI 420 IKRKDTMNER TNEERERWMD ERMGATMELV GLRF

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MDGNNGWGRD DGIVMILPDF SDDVPSDGFD VHGGGADYIV QPTAPNQPSK DNPSFVSADV  60
NPVGVPHSSG DVDGRVGILP VIDDRTRRNS SLNAKSSKKK NGYYHRRNGE KKERLIWTPE  120
LHQCFLEYYN QSSNQKRVPK KILEEMRRKF PYVTRENVAS HLQKHRLYLK HSNNKEEEKL  180
SKPSTKSVPR KQINEESNIH QILNNTAIST CPNAILPHQS HSISINPNTQ PPLQTHTLQE  240
PMQNQVFSQF DDTHLIEQDI VLMPSSFDPW NDLPYSNTMN VIDPFGGQSS NAASCLPVMV  300
DNFTPPMLSY HQLVISNIDG NGYGNDNGNS FHPMMGNTFG GLSINNYSNG ALPNTVDYNM  360
NYQLDNVQFH DINDIYALGN YPDSLQFDYP LNFNFQNELQ VQDFDQAVQS MLYPPATHLI  420
IKRKDTMNER TNEERERWMD ERMGATMELV GLRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	2e-14	ARR-B family protein