PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514545.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 169aa MW: 18173.1 Da PI: 8.6975

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00013	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F ++ L H++ H XP_023514545.1 44 FRCQFCHRVFANSQALGGHQNAH 66 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MSNQNPSSIL KLFGVPLVEH DDLPPATPDG GGGDDTNSDY DRKFRCQFCH RVFANSQALG 60 GHQNAHKRER QRAKRALYFH ASDHHLAAAL RPLPFYSSVF PANIGGGGGH RGYRFVPRSD 120 NGYFTAAYGG VSVGSGRWMF GNSGEGGEKG STDDVGVVDL HLKLSPSGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58070.1	1e-13	C2H2 family protein