PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 236aa MW: 27513.8 Da PI: 9.0065 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104 | 7.9e-33 | 98 | 155 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts C+vkk+ver+ +dp++v++tYeg+H+h+ XP_023513700.1 98 EDGYRWRKYGQKAVKNSPYPRSYYRCTSVACHVKKRVERCLKDPSIVITTYEGQHTHS 155 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MELDLIWSQF DMFSTSSYPI QNPAIDPENL EILNAWPTSS SQLINDELSE LNLEEEKKPR 60 QKTVKSNHSS KTKKTNQKKK EQEQRYTFMT KSKVDHLEDG YRWRKYGQKA VKNSPYPRSY 120 YRCTSVACHV KKRVERCLKD PSIVITTYEG QHTHSTPVMT RSTFFPPPIS TSLHEGSTSF 180 TTTPPYLFHN QNVHNLNFAR HPNDFVAPSF HHERLPQHTA SFDPFTHLFA STTNYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 9e-42 | WRKY family protein |