PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513595.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 277aa MW: 29854.4 Da PI: 7.9167

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.5	2.4e-38	50	157	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a+ s+s+++ s+++a + + XP_023513595.1 50 APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLD 144 789******************************************************************99977777777777777755555555 PP TCP 97 skksqksaasaln 109 + +++ a n XP_023513595.1 145 GVARPNWAMMGAN 157 5555555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAEHNNKKPS PPASTPTTIT PPPPPPSADI KDFSIIIASK DENKHHQQLA PKRTSNKDRH 60 KKVDGRGRRI RMPALCAARV FQLTRELGHK TDGETIQWLL QQAEPSIIAA TGSGTIPASA 120 LHAAGVSVSD QETSISAALT PKLDGVARPN WAMMGANLNR SHMATAGFWP SLGGIGTGFV 180 SENSGSIMPK FGFHGFEFQG MNLGSMNFPT IIGNQHQQHV PGLELGLSQE GNNLRGMLNP 240 PSYSQIYHQI EQNRDSSGGG SLEQDQAPEK DDSEQSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-71	TCP family protein