PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513554.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 264aa    MW: 28862.2 Da    PI: 7.1261
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18187221135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_023513554.1 187 CLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRL 221
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MESSLAFMDD LLDFSSDIGE EDEEDDVVPP RSSTAADSSE FNAASLPDDT SSGRILLEDC  60
GEEELEWLSN EDAFPAVSTF VDILSDHHHH PPPPLTTVSK QNSPVSVLES SSVSSHSETN  120
STKSSSHGSV LMSCCVGLKV PSKARSKRRR GRHISGHHLW FKQQPSSRNV KQVVPTTTTT  180
TAIGRKCLHC GAEKTPQWRA GPLGPKTLCN ACGVRFKSGR LVPEYRPASS PTFSPVLHSN  240
SHRKVMEMRR QKQLSTVVNP MDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-57GATA family protein