PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023513311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 506aa MW: 56837.8 Da PI: 7.5602 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.9 | 1.9e-19 | 22 | 77 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_023513311.1 22 KKRKLKTPTQLIALEKFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 506 aa Download sequence |
MEQELGNAMH SEENKDSTEK NKKRKLKTPT QLIALEKFYN DHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDHGSG LAQDSCGSTK NGDYWHVDPR 120 EVESQKPYGR ELATDNVLER RTHYAENVSN MENTSSESSS SLKDRLLSQS ENPYDTEVSQ 180 YLTHESAFPP SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPSLGVEF 240 QPLPPGAFES QAKGPIHDSY YVGNALLPRS PDTLTMKKQR ALVSRYEVLS SNMSSQDSYM 300 EEAAPTGITC RPECQENNSI YPLKKCSNYY NKTDPFPRQN SPLNMYEESG GLTLSSSSKR 360 DRRMNSDYNV PRSRTGSVSN NHGSYSSKVA SEQTETPLHN RGSVGSKSFC RSGYLDYNPK 420 KMSKEMFNGE EKAVNESSDP VRGKIPPTNE LAVAYRSPLD LPRSGYAAKA SFSEKPGRKN 480 HTSRSTMEMP YSFTVDEAED TSSSLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G03250.1 | 2e-83 | HB-other family protein |