PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513310.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HB-other

Protein Properties

Length: 515aa MW: 57817 Da PI: 7.5113

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++ql +Le++++ ++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_023513310.1 31 KKRKLKTPTQLIALEKFYNDHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 86 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALEKFYND HKYPTEEMKS 60 QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDHGSGL AQDSCGSTKN 120 GDYWHVDPRE VESQKPYGRE LATDNVLERR THYAENVSNM ENTSSESSSS LKDRLLSQSE 180 NPYDTEVSQY LTHESAFPPS NPKALNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE 240 DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNALLPRSP DTLTMKKQRA LVSRYEVLSS 300 NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKCSNYYN KTDPFPRQNS PLNMYEESGG 360 LTLSSSSKRD RRMNSDYNVP RSRTGSVSNN HGSYSSKVAS EQTETPLHNR GSVGSKSFCR 420 SGYLDYNPKK MSKEMFNGEE KAVNESSDPV RGKIPPTNEL AVAYRSPLDL PRSGYAAKAS 480 FSEKPGRKNH TSRSTMEMPY SFTVDEAEDT SSSLD

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MEQVICCFVL NSELGNAMHS EENKDSTEKN KKRKLKTPTQ LIALEKFYND HKYPTEEMKS  60
QLAEQLGLTE KQISGWFCHR RLKDKRFCET YTSVRQDRSS GVIQDHGSGL AQDSCGSTKN  120
GDYWHVDPRE VESQKPYGRE LATDNVLERR THYAENVSNM ENTSSESSSS LKDRLLSQSE  180
NPYDTEVSQY LTHESAFPPS NPKALNSLRY KPSGYLKVKG EAENAAITAV KRQLGVQYRE  240
DGPSLGVEFQ PLPPGAFESQ AKGPIHDSYY VGNALLPRSP DTLTMKKQRA LVSRYEVLSS  300
NMSSQDSYME EAAPTGITCR PECQENNSIY PLKKCSNYYN KTDPFPRQNS PLNMYEESGG  360
LTLSSSSKRD RRMNSDYNVP RSRTGSVSNN HGSYSSKVAS EQTETPLHNR GSVGSKSFCR  420
SGYLDYNPKK MSKEMFNGEE KAVNESSDPV RGKIPPTNEL AVAYRSPLDL PRSGYAAKAS  480
FSEKPGRKNH TSRSTMEMPY SFTVDEAEDT SSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-83	HB-other family protein